TJGR Creating track from Gil MGon RNA-seq reads

start

exporting as SAM

http://eagle.fish.washington.edu/cnidarian/Gil_1%20(paired)%20RNA-Seq%20(Reads).sam

and BAM

http://eagle.fish.washington.edu/cnidarian/Gil_1%20(paired)%20RNA-Seq%20(Reads).bam

SAM to Galaxy and changed to interval

http://eagle.fish.washington.edu/cnidarian/Galaxy53-[Converted_Interval].interval

CLC exon discovery

#sucks

Stats for target region

Gill RNA-seq and diff Methylation tiles

Gil_1 (paired) RNA-Seq (Reads, coverage report).xls

Gonad RNA-seq and diff Methylation tiles

Mgo_1 (paired) RNA-Seq (coverage report).xls